Welcome to simexp’s documentation!

Please help us write this documentation

Community

• SIMEXP manifesto
• SIMEXP lab code of conduct
• Welcome guide

Alliance Canada

• Let’s get started
• Using the nearline storage server on Beluga
• Using super computers from Alliance Canada

Data management

• Project management

Giga Preprocessing

• Preprocesing datasets on Beluga with fMRIPrep
• Quality control from fMRIPrep outputs

Tutorials

• Make a python project from zero
• An introduction of UNIX system and the command line
• Deep learning on a remote server
• Executable environment on the cloud with Binder
• Encrypt your GitHub repository with git-crypt
• Submit a GitHub PR
• Secure Shell connection
• Jupyter notebooks and python virtual environment

Indices and tables

• Index
• Module Index
• Search Page